DetectorInput for Absorption(r,z)

DetectorInput for total absorption

Implements ISourceInput. Defines input data for CustomCircularSource implementation including inner and outer radius, source profile, polar angle range, azimuthal angle range, direction, position, inward normal beam rotation and initial tissue region index.

Implements ISourceInput. Defines input data for CustomEllipticalSource implementation including a and b parameter, source profile, polar angle range, azimuthal angle range, direction, position, inward normal beam rotation, and initial tissue region index.

Implements ISourceInput. Defines input data for CustomLineSource implementation including line length, source profile, polar angle range, azimuthal angle range, direction, position, inward normal beam rotation and initial tissue region index.

Implements ISourceInput. Defines input data for CustomLineSource implementation including polar angle range, azimuthal angle range, emitting point location, direction and initial tissue region index.

Implements ISourceInput. Defines input data for CustomRectangularSource implementation including length, width, source profile, polar angle range, azimuthal angle range, direction, position, inward normal beam rotation and initial tissue region index.

Implements ISourceInput. Defines input data for CustomSurfaceEmittingSphericalSource implementation including radius, source profile, polar angle range, azimuthal angle range, direction, position and initial tissue region index.

Implements ISourceInput. Defines input data for CustomVolumetricCuboidalSource implementation including length, width, height, source profile, polar angle range, azimuthal angle range, direction, position and initial tissue region index.

Implements ISourceInput. Defines input data for CustomVolumetricEllipsoidalSource implementation including a,b and c parameters, source profile, polar angle range, azimuthal angle range, direction, position and initial tissue region index.

Implements ISourceInput. Defines input data for DirectionalCircularSource implementation including converging/diverging angle, inner and outer radius, source profile, direction, position, inward normal beam rotation and initial tissue region index.

Implements ISourceInput. Defines input data for DirectionalellipticalSource implementation including converging/diverging angle, a and b parameters, source profile, direction, position, inward normal beam rotation and initial tissue region index.

Implements ISourceInput. Defines input data for DirectionalLineSource implementation including converging/diverging angle, line length, source profile, direction, position, inward normal beam rotation and initial tissue region index.

Implements ISourceInput. Defines input data for CustomLineSource implementation including converging/diverging angle, emitting point location, direction and initial tissue region index.

Implements ISourceInput. Defines input data for DirectionalRectangularSource implementation including converging/diverging angle, length, width, source profile, direction, position, inward normal beam rotation and initial tissue region index.

DetectorInput for dMC dR(r)/dMua.

This verifies dMCROfRhoDMuaDetectorInput

DetectorInput for dMC dR(r)/dMus.

This verifies dMCROfRhoDMusDetectorInput

DetectorInput for Flu(r,z,t)

DetectorInput for Flu(r,z)

DetectorInput for Flu(x,y,z)

Implements ISourceInput. Defines input data for IsotropicLineSource implementation including line length, source profile, direction, position, inward normal beam rotation and initial tissue region index.

Implements ISourceInput. Defines input data for IsotropicPointSource implementation including emitting position, direction and initial tissue region index.

Implements ISourceInput. Defines input data for IsotropicVolumetricCuboidalSource implementation including length, width, height, source profile, direction, position, and initial tissue region index.

Implements ISourceInput. Defines input data for IsotropicVolumetricCuboidalSource implementation including length, width, height, source profile, direction, position, and initial tissue region index.

Implements ISourceInput. Defines input data for LambertianSurfaceEmittingCuboidalSource implementation including length, width, height, source profile, direction, position, and initial tissue region index.

Implements ISourceInput. Defines input data for LambertianSurfaceEmittingCylindricalFiberSource implementation including tube radius, tube height, curved surface efficiency, bottom surface efficiency, direction, position, and initial tissue region index.

Implements ISourceInput. Defines input data for LambertianSurfaceEmittingSphericalSource implementation including radius, position and initial tissue region index.

Implements ISourceInput. Defines input data for LambertianSurfaceEmittingTubularSource implementation including tube radius, height, direction, position and initial tissue region index.

Provides main processing for Monte Carlo simulation.

Implements ITissueInput. Defines input to SingleEllipsoidTissue class.

Implements ITissueInput. Defines input to MultiLayerTissue class.

This verifies the structure of a MultiLayerTissue

Handles all data and methods necessary to photon biography generation.

Stores list of PhotonDataPoint that captures one photon's biography data.

DetectorInput for pMC R(fx, t)

DetectorInput for pMC R(fx).

DetectorInput for pMC R(r,time).

DetectorInput for pMC R(r).

Implements various commonly used PostProcessorInput classes for various tissue types.

This class validates whether the fields in PostProcessorInput have been specified correctly or not.

DetectorInput for volume detector R(rho,z,angle)

DetectorInput for surface detector Radiance(rho)

DetectorInput for volume detector Radiance(x, y, z, theta, phi)

DetectorInput for Rdiffuse

DetectorInput for Flu(r,z)

DetectorInput for Flu(r,z)

DetectorInput for R(angle)

DetectorInput for R(r,t)

DetectorInput for R(fx)

DetectorInput for R(r,angle)

DetectorInput for R(r,omega)

DetectorInput for R(r,t)

DetectorInput for R(r)

DetectorInput for R(x,y)

DetectorInput for specular reflectance

Defines input to the Monte Carlo simulation. This includes the output file name, number of photons to execute (N), source, tissue and detector definitions.

Implements various commonly used SimulationInput classes for various tissue types.

This sanity checks SimulationInput

Designates random number generator, absorption weighting type and flags input to the Monte Carlo simulation (e.g. tally second moment and specify seed for RNG).

Helper class to surface the results of a Monte Carlo simulation in a user-friendly (strongly-typed) way

This class captures informational statistics of the MC simulation executed

Implements ITissueInput. Defines input to SingleEllipsoidTissue class.

This verifies that the ellipsoid is entirely contained within tissue layer, that only one tissue layer is defined, and that the refractive index of the tissue layer and ellipsoid match.

Implements various commonly used SourceInput classes.

DetectorInput for Tdiffuse

DetectorInput for Time(angle)

DetectorInput for R(r,angle)

DetectorInput for T(r)

Properties and methods that all IDetectors must implement

Defines a contract for Monte Carlo tallies.

Interface for Controller classes that manage the detectors.

Defines a contract for DetectorInput classes.

Properties and methods that all IDetectors must implement

Defines a contract for Monte Carlo tallies.

This is a contract for perturbation Monte Carlo (pMC) detector inputs. It describes the additional properties from IDetectorInput needed to perform the pMC detection.

Defines a contract for Source classes for Monte Carlo simulation.

Defines a contract for SourceInput classes.

Defines a contract for Tissue classes in Monte Carlo simulation.

Defines a contract for TissueInput.

Defines contract for TissueRegion classes.

Defines a contract for Virtual Boundary classes in Monte Carlo simulation.

Source angle distribution types

Flag indicating whether the photon hit a actual tissue boundary or a virtual boundary

This should match VirtualBoundaryType one for one. Commented out ones have not made it to the white list yet.

PhotonStateType is a bitmap of Photon.StateFlag. Combinations of bits indicate the current state of the photon. These states communicate what to do with the photon. ref: http://www.codeproject.com/Articles/37921/Enums-Flags-and-Csharp-Oh-my-bad-pun.aspx or http://stackoverflow.com/questions/93744/most-common-c-bitwise-operations

Orientation types of the source

Source beam profile types

Source types defined organized by dimension and geometric type

The different types of tallies available

Tissue types

Virtual boundaries are entities upon which detectors are attached. Each detector is associated with one and only one of the following types. The VBs have a spatial location (surface or volume) and sometimes have a direction.